Hyeon-Jin Kim

Graduate Student

I’m a Genome Sciences graduate student jointly advised by Cole and Doug Fowler. I’m interested in combining microscopy and single cell sequencing technologies to understand transcriptional dynamics in diseases. I earned a B.S. in Applied Computational Mathematical Sciences, Biochemistry, and Chemistry from University of Washington. As an undergrad, I worked in the Vaughan lab, where I helped develop new methods for Expansion Microscopy and apply them to study neural development in Drosophila melanogaster.


A lineage-resolved molecular atlas of C. elegans embryogenesis at single-cell resolution

A Genome-wide Framework for Mapping Gene Regulation via Cellular Genetic Screens

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks