Sanjay Srivatsan

Postdoctoral fellow
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sanjaysobfuscate@uw.edu

I’m an MD/PhD student at the University of Washington. My postdoctoral research is joint between the Trapnell and Shendure labs.

My prior education includes a bachelor’s degree in Bioengineering with an emphasis in Stem Cell Engineering from the University of California, Berkeley. Before matriculating at University of Washington, I worked as a crystallographer in Peter Kwong’s lab at the National Institutes of Health. There, I focused primarily on the development of structure-based vaccine for HIV-1, and trained in the techniques of protein biochemistry and X-Ray crystallography.

In my free time I like turtles, sipping coffee and climbing rocks.

Papers

Deep molecular, cellular and temporal phenotyping of developmental perturbations at whole organism scale

Proteostasis governs differential temperature sensitivity across embryonic cell types

Single-cell analysis of chromatin and expression reveals age- and sex-associated alterations in the human heart

Nuclear oligo hashing improves differential analysis of single-cell RNA-seq

Embryo-scale, single-cell spatial transcriptomics

Transcriptomic profiling of tissue environments critical for post-embryonic patterning and morphogenesis of zebrafish skin

Massively multiplex chemical transcriptomics at single cell resolution

Aligning Single-Cell Developmental and Reprogramming Trajectories Identifies Molecular Determinants of Myogenic Reprogramming Outcome

Cicero predicts cis-regulatory DNA interactions from single-cell chromatin accessibility data