Currently available pre-trained classifiers:
| Classifier | Marker file | Species | Tissue | Contributer | Training data source | Publication | Date posted |
|---|---|---|---|---|---|---|---|
| hsLung | hsLung_markers.txt | Human | Lung | Hannah Pliner | Lambrechts et. al. | Pliner et. al. | 2019-10-17 |
| hsPBMC | hsPBMC_markers.txt | Human | PBMC | Hannah Pliner | 10x Genomics | Pliner et. al. | 2019-10-17 |
| mmLung | mmLung_markers.txt | Mouse | Lung | Hannah Pliner | Han et. al. | Pliner et. al. | 2019-10-17 |
| ceWhole | ceWhole_markers.txt | C. elegans | Whole | Hannah Pliner | Cao et. al. | Pliner et. al. | 2019-10-17 |
| mmBrain | mmBrain_markers.txt | Mouse | Brain and spinal cord | Hannah Pliner | Zeisel et. al. | Pliner et. al. | 2019-10-17 |
More classifiers trained on human fetal tissue are available for download here
Help build this resource! See here, to learn how to submit your own classifier!
Prior versions of pre-trained classifiers:
| Classifier | Marker file | Species | Tissue | Contributer | Training data source | Publication | Date posted |
|---|---|---|---|---|---|---|---|
| hsLung | hsLung_markers.txt | Human | Lung | Hannah Pliner | Lambrechts et. al. | Pliner et. al. | 2019-09-11 |
| hsPBMC | hsPBMC_markers.txt | Human | PBMC | Hannah Pliner | 10x Genomics | Pliner et. al. | 2019-09-11 |
| mmLung | mmLung_markers.txt | Mouse | Lung | Hannah Pliner | Han et. al. | Pliner et. al. | 2019-09-11 |
| ceWhole | ceWhole_markers.txt | C. elegans | Whole | Hannah Pliner | Cao et. al. | Pliner et. al. | 2019-09-11 |
| mmBrain | mmBrain_markers.txt | Mouse | Brain and spinal cord | Hannah Pliner | Zeisel et. al. | Pliner et. al. | 2019-09-11 |